DCG: Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis

Package: DCG 0.9.3

Jessica Vandeleest

DCG: Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis

Data cloud geometry (DCG) applies random walks in finding community structures for social networks. Fushing, VanderWaal, McCowan, & Koehl (2013) (<doi:10.1371/journal.pone.0056259>).

Authors:Chen Chen [aut], Jian Jin [aut], Jessica Vandeleest [aut, cre], Brianne Beisner [aut], Brenda McCowan [aut, cph], Hsieh Fushing [aut, cph]

DCG_0.9.3.tar.gz
DCG_0.9.3.zip(r-4.7-any)DCG_0.9.3.zip(r-4.6-any)DCG_0.9.3.zip(r-4.5-any)
DCG_0.9.3.tgz(r-4.6-any)DCG_0.9.3.tgz(r-4.5-any)
DCG_0.9.3.tar.gz(r-4.7-any)DCG_0.9.3.tar.gz(r-4.6-any)
DCG_0.9.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
DCG/json (API)

# Install 'DCG' in R:

install.packages('DCG', repos = c('https://hanettools.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/hanettools/dcg/issues

Datasets:

monkeyGrooming - Grooming network data

On CRAN:

4.80 score 208 scripts 252 downloads 3 mentions 8 exports 0 dependencies

Last updated from:93d15e2cc5. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	128
source / vignettes	OK	233
linux-release-x86_64	OK	152
macos-release-arm64	OK	106
macos-oldrel-arm64	OK	75
windows-devel	OK	77
windows-release	OK	77
windows-oldrel	OK	81
wasm-release	OK	110

Dependencies:

Introduction to DCG

Rendered fromIntroduction_to_DCG.Rmdusingknitr::rmarkdown

Help page	Topics
Convert a matrix to a similarity matrix. 'as.SimilarityMatrix' convert an adjacency matrix to a similarity matrix.	as.SimilarityMatrix
convert to a symmetric adjacency matrix	as.symmetricAdjacencyMatrix
generate eigenvalues for all ensemble matrices 'getEigenvalueList' get eigenvalues from ensemble matrices	getEigenvalueList
generate ensemble matrix 'getEns' get ensemble matrix from given similarity matrix and temperature	getEns
generating a list of ensemble matrices based on the similarity matrix and temperatures	getEnsList
'GetSim' get similarity matrix from a distance matrix	GetSim
Grooming network data	monkeyGrooming
generate tree plots for each ensemble matrix 'plotCLUSTERS' plot all cluster trees	plotCLUSTERS
plot eigenvalues 'plotMultiEigenvalues' plot eigenvalues to determine number of communities by finding the elbow point	plotMultiEigenvalues
generate tree plots for selected ensemble matrix 'plotTrees' plot one cluster tree	plotTheCluster
generate temperatures 'temperatureSample' generate tempatures based on either random or fixed intervals	temperatureSample

Help page

Topics

Convert a matrix to a similarity matrix. 'as.SimilarityMatrix' convert an adjacency matrix to a similarity matrix.

as.SimilarityMatrix

convert to a symmetric adjacency matrix

as.symmetricAdjacencyMatrix

generate eigenvalues for all ensemble matrices 'getEigenvalueList' get eigenvalues from ensemble matrices

getEigenvalueList

generate ensemble matrix 'getEns' get ensemble matrix from given similarity matrix and temperature

getEns

generating a list of ensemble matrices based on the similarity matrix and temperatures

getEnsList